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Merge pull request #1613 from Human-Connection/helm

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feat(deployment): Add helm charts for deploy
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mattwr18 2020-02-11 20:33:09 +01:00 committed by GitHub
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2
deployment/.gitignore vendored
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@ -2,3 +2,5 @@ secrets.yaml
configmap.yaml
**/secrets.yaml
**/configmap.yaml
**/staging-values.yaml
**/production-values.yaml

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deployment/README.md
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# Human-Connection Nitro \| Deployment Configuration
We deploy with [kubernetes](https://kubernetes.io/). In order to deploy your own
network you have to [install kubectl](https://kubernetes.io/docs/tasks/tools/install-kubectl/)
and get a kubernetes cluster.
There are a couple different ways we have tested to deploy an instance of Human Connection, with [kubernetes](https://kubernetes.io/) and via [Helm](https://helm.sh/docs/). In order to manage your own
network, you have to [install kubectl](https://kubernetes.io/docs/tasks/tools/install-kubectl/), [install Helm](https://helm.sh/docs/intro/install/) (optional, but the preferred way),
and set up a kubernetes cluster. Since there are many different options to host your cluster, we won't go into specifics here.
We have tested two different kubernetes providers: [Minikube](./minikube/README.md)
and [Digital Ocean](./digital-ocean/README.md).
Check out the specific documentation for your provider. After that, learn how
to apply the specific kubernetes configuration for [Human Connection](./human-connection/README.md).
Check out the specific documentation for your provider. After that, choose whether you want to go with the recommended deploy option [Helm](./helm/README.md), or use kubernetes to apply the configuration for [Human Connection](./human-connection/README.md).

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deployment/helm/human-connection/.helmignore Normal file
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# Patterns to ignore when building packages.
# This supports shell glob matching, relative path matching, and
# negation (prefixed with !). Only one pattern per line.
.DS_Store
# Common VCS dirs
.git/
.gitignore
.bzr/
.bzrignore
.hg/
.hgignore
.svn/
# Common backup files
*.swp
*.bak
*.tmp
*~
# Various IDEs
.project
.idea/
*.tmproj
.vscode/

5
deployment/helm/human-connection/Chart.yaml Normal file
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apiVersion: v1
appVersion: "0.3.1"
description: A Helm chart for Human Connection
name: human-connection
version: 0.1.0

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deployment/helm/human-connection/README.md Normal file
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# Helm installation of Human Connection
Deploying Human Connection with Helm is very straight forward. All you have to
do is to change certain parameters, like domain names and API keys, then you
just install our provided Helm chart to your cluster.
## Configuration
You can customize the network with your configuration by changing the `values.yaml`, all variables will be available as
environment variables in your deployed kubernetes pods.
Probably you want to change this environment variable to your actual domain:
```bash
# in folder /deployment/helm
CLIENT_URI: "https://develop.human-connection.org"
```
If you want to edit secrets, you have to `base64` encode them. See [kubernetes documentation](https://kubernetes.io/docs/concepts/configuration/secret/#creating-a-secret-manually). You can also use `helm-secrets`, but we have yet to test it.
```bash
# example how to base64 a string:
$ echo -n 'admin' | base64
YWRtaW4=
```
Those secrets get `base64` decoded and are available as environment variables in
your deployed kubernetes pods.
# https
If you start with setting up the `https`, when you install the app, it will automatically take care of the certificates for you.
First check that you are using `Helm v3`, this is important since it removes the need for `Tiller`. See, [FAQ](https://helm.sh/docs/faq/#removal-of-tiller)
```bash
$ helm version
# output should look similar to this:
#version.BuildInfo{Version:"v3.0.2", GitCommit:"19e47ee3283ae98139d98460de796c1be1e3975f", GitTreeState:"clean", GoVersion:"go1.13.5"}
```
Apply cert-manager CRDs before installing (or it will fail)
```bash
$ kubectl apply --validate=false -f https://raw.githubusercontent.com/jetstack/cert-manager/release-0.13.0/deploy/manifests/00-crds.yaml
```
Next, create the `cert-manager` namespace
```bash
$ kubectl create namespace cert-manager
```
Add the `jetstack` repo and update
```bash
$ helm repo add jetstack https://charts.jetstack.io
$ helm repo update
```
Install cert-manager
```bash
$ helm install cert-manager --namespace cert-manager --version v0.13.0 jetstack/cert-manager
```
# Deploy
Once you are satisfied with the configuration, you can install the app.
```bash
# in folder /deployment/helm/human-connection
$ helm install develop ./ --namespace human-connection
```
Where `develop` is the release name, in this case develop for our develop server and `human-connection` is the namespace, again customize for your needs. The release name can be anything you want. Just keep in mind that it is used in the templates to prepend the `CLIENT_URI` and other places.
This will set up everything you need for the network, including `deployments`, and their `pods`, `services`, `ingress`, `volumes`(PersitentVolumes), `PersistentVolumeClaims`, and even `ClusterIssuers` for https certificates.

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deployment/helm/human-connection/templates/cluster-issuers/letsencrypt-prod.yaml Normal file
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apiVersion: cert-manager.io/v1alpha2
kind: ClusterIssuer
metadata:
name: letsencrypt-prod
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
acme:
server: https://acme-v02.api.letsencrypt.org/directory
email: {{ .Values.supportEmail }}
privateKeySecretRef:
name: letsencrypt-prod
solvers:
- http01:
ingress:
class: nginx

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deployment/helm/human-connection/templates/cluster-issuers/letsencrypt-staging.yaml Normal file
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apiVersion: cert-manager.io/v1alpha2
kind: ClusterIssuer
metadata:
name: letsencrypt-staging
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
acme:
server: https://acme-staging-v02.api.letsencrypt.org/directory
email: {{ .Values.supportEmail }}
privateKeySecretRef:
name: letsencrypt-staging
solvers:
- http01:
ingress:
class: nginx

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deployment/helm/human-connection/templates/deployments/deployment-backend.yaml Normal file
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apiVersion: apps/v1
kind: Deployment
metadata:
name: {{ .Release.Name }}-backend
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
replicas: 1
minReadySeconds: 15
progressDeadlineSeconds: 60
strategy:
rollingUpdate:
maxSurge: 0
maxUnavailable: "100%"
selector:
matchLabels:
human-connection.org/selector: deployment-backend
template:
metadata:
name: deployment-backend
annotations:
backup.velero.io/backup-volumes: uploads
labels:
human-connection.org/commit: {{ .Values.commit }}
human-connection.org/selector: deployment-backend
spec:
containers:
- name: backend
image: "{{ .Values.backendImage }}:{{ .Chart.AppVersion }}"
imagePullPolicy: {{ .Values.image.pullPolicy }}
envFrom:
- configMapRef:
name: {{ .Release.Name }}-configmap
- secretRef:
name: {{ .Release.Name }}-secrets
ports:
- containerPort: 4000
protocol: TCP
resources: {}
terminationMessagePath: /dev/termination-log
terminationMessagePolicy: File
volumeMounts:
- mountPath: /nitro-backend/public/uploads
name: uploads
dnsPolicy: ClusterFirst
restartPolicy: Always
schedulerName: default-scheduler
securityContext: {}
terminationGracePeriodSeconds: 30
volumes:
- name: uploads
persistentVolumeClaim:
claimName: uploads-claim
status: {}

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deployment/helm/human-connection/templates/deployments/deployment-mailserver.yaml Normal file
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{{- if .Values.developmentMailserverDomain }}
apiVersion: apps/v1
kind: Deployment
metadata:
name: {{ .Release.Name }}-mailserver
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
replicas: 1
minReadySeconds: 15
progressDeadlineSeconds: 60
selector:
matchLabels:
human-connection.org/selector: deployment-mailserver
template:
metadata:
labels:
human-connection.org/selector: deployment-mailserver
name: mailserver
spec:
containers:
- name: mailserver
image: djfarrelly/maildev
imagePullPolicy: {{ .Values.image.pullPolicy }}
ports:
- containerPort: 80
- containerPort: 25
envFrom:
- configMapRef:
name: {{ .Release.Name }}-configmap
- secretRef:
name: {{ .Release.Name }}-secrets
restartPolicy: Always
terminationGracePeriodSeconds: 30
status: {}
{{- end}}

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deployment/helm/human-connection/templates/deployments/deployment-maintenance.yaml Normal file
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apiVersion: apps/v1
kind: Deployment
metadata:
name: {{ .Release.Name }}-maintenance
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
selector:
matchLabels:
human-connection.org/selector: deployment-maintenance
template:
metadata:
labels:
human-connection.org/commit: {{ .Values.commit }}
human-connection.org/selector: deployment-maintenance
name: maintenance
spec:
containers:
- name: maintenance
env:
- name: HOST
value: 0.0.0.0
image: "{{ .Values.maintenanceImage }}:{{ .Chart.AppVersion }}"
ports:
- containerPort: 80
imagePullPolicy: Always
restartPolicy: Always
terminationGracePeriodSeconds: 30

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deployment/helm/human-connection/templates/deployments/deployment-neo4j.yaml Normal file
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apiVersion: apps/v1
kind: Deployment
metadata:
name: {{ .Release.Name }}-neo4j
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
replicas: 1
strategy:
rollingUpdate:
maxSurge: 0
maxUnavailable: "100%"
selector:
matchLabels:
human-connection.org/selector: deployment-neo4j
template:
metadata:
name: neo4j
annotations:
backup.velero.io/backup-volumes: neo4j-data
labels:
human-connection.org/commit: {{ .Values.commit }}
human-connection.org/selector: deployment-neo4j
spec:
containers:
- name: neo4j
image: "{{ .Values.neo4jImage }}:{{ .Chart.AppVersion }}"
imagePullPolicy: {{ .Values.image.pullPolicy }}
ports:
- containerPort: 7687
- containerPort: 7474
resources:
requests:
memory: {{ .Values.neo4jResourceRequestsMemory | default "1G" | quote }}
limits:
memory: {{ .Values.neo4jResourceLimitsMemory | default "1G" | quote }}
envFrom:
- configMapRef:
name: {{ .Release.Name }}-configmap
volumeMounts:
- mountPath: /data/
name: neo4j-data
volumes:
- name: neo4j-data
persistentVolumeClaim:
claimName: neo4j-data-claim
restartPolicy: Always
terminationGracePeriodSeconds: 30

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deployment/helm/human-connection/templates/deployments/deployment-web.yaml Normal file
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apiVersion: apps/v1
kind: Deployment
metadata:
name: {{ .Release.Name }}-webapp
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
replicas: 2
minReadySeconds: 15
progressDeadlineSeconds: 60
selector:
matchLabels:
human-connection.org/selector: deployment-webapp
template:
metadata:
name: webapp
labels:
human-connection.org/commit: {{ .Values.commit }}
human-connection.org/selector: deployment-webapp
spec:
containers:
- name: webapp
image: "{{ .Values.webappImage }}:{{ .Chart.AppVersion }}"
imagePullPolicy: {{ .Values.image.pullPolicy }}
envFrom:
- configMapRef:
name: {{ .Release.Name }}-configmap
- secretRef:
name: {{ .Release.Name }}-secrets
env:
- name: HOST
value: 0.0.0.0
ports:
- containerPort: 3000
resources: {}
imagePullPolicy: Always
restartPolicy: Always
terminationGracePeriodSeconds: 30
status: {}

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deployment/helm/human-connection/templates/ingress/ingress.template.yaml Normal file
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apiVersion: extensions/v1beta1
kind: Ingress
metadata:
name: {{ .Release.Name }}-ingress
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
annotations:
kubernetes.io/ingress.class: "nginx"
cert-manager.io/cluster-issuer: {{ .Values.letsencryptIssuer }}
nginx.ingress.kubernetes.io/proxy-body-size: 10m
spec:
tls:
- hosts:
- {{ .Values.domain }}
secretName: tls
rules:
- host: {{ .Values.domain }}
http:
paths:
- path: /
backend:
serviceName: {{ .Release.Name }}-webapp
servicePort: 3000
{{- if .Values.developmentMailserverDomain }}
- host: {{ .Values.developmentMailserverDomain }}
http:
paths:
- path: /
backend:
serviceName: {{ .Release.Name }}-mailserver
servicePort: 80
{{- end }}

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deployment/helm/human-connection/templates/jobs/job-db-migration.yaml Normal file
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apiVersion: batch/v1
kind: Job
metadata:
name: {{ .Release.Name }}-db-migrations
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
annotations:
"helm.sh/hook": post-upgrade
"helm.sh/hook-weight": "5"
"helm.sh/hook-delete-policy": hook-succeeded, hook-failed
spec:
template:
metadata:
name: {{ .Release.Name }}
spec:
restartPolicy: Never
containers:
- name: db-migrations-job
image: "{{ .Values.backendImage }}:latest"
command: ["/bin/sh", "-c", "{{ .Values.dbMigrations }}"]
envFrom:
- configMapRef:
name: {{ .Release.Name }}-configmap
- secretRef:
name: {{ .Release.Name }}-secrets

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deployment/helm/human-connection/templates/services/service-backend.yaml Normal file
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apiVersion: v1
kind: Service
metadata:
name: {{ .Release.Name }}-backend
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
ports:
- name: graphql
port: 4000
targetPort: 4000
selector:
human-connection.org/selector: deployment-backend

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deployment/helm/human-connection/templates/services/service-mailserver.yaml Normal file
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{{- if .Values.developmentMailserverDomain }}
apiVersion: v1
kind: Service
metadata:
name: {{ .Release.Name }}-mailserver
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
ports:
- name: web
port: 80
targetPort: 80
- name: smtp
port: 25
targetPort: 25
selector:
human-connection.org/selector: deployment-mailserver
{{- end}}

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deployment/helm/human-connection/templates/services/service-maintenance.yaml Normal file
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apiVersion: v1
kind: Service
metadata:
name: {{ .Release.Name }}-maintenance
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
ports:
- name: web
port: 80
targetPort: 80
selector:
human-connection.org/selector: deployment-maintenance

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deployment/helm/human-connection/templates/services/service-neo4j.yaml Normal file
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apiVersion: v1
kind: Service
metadata:
name: {{ .Release.Name }}-neo4j
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
ports:
- name: bolt
port: 7687
targetPort: 7687
- name: web
port: 7474
targetPort: 7474
selector:
human-connection.org/selector: deployment-neo4j

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deployment/helm/human-connection/templates/services/service-webapp.yaml Normal file
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apiVersion: v1
kind: Service
metadata:
name: {{ .Release.Name }}-webapp
labels:
app.kubernetes.io/instance: {{ .Release.Name }}
app.kubernetes.io/managed-by: {{ .Release.Service }}
app.kubernetes.io/name: human-connection
app.kubernetes.io/version: {{ .Chart.AppVersion }}
helm.sh/chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
spec:
ports:
- name: {{ .Release.Name }}-webapp
port: 3000
protocol: TCP
targetPort: 3000
selector:
human-connection.org/selector: deployment-webapp

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deployment/helm/human-connection/templates/volumes/pvc-neo4j-data.yaml Normal file
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apiVersion: v1
kind: PersistentVolumeClaim
metadata:
name: neo4j-data-claim
spec:
accessModes:
- ReadWriteOnce
resources:
requests:
storage: {{ .Values.neo4jStorage }}

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deployment/helm/human-connection/templates/volumes/pvc-uploads.yaml Normal file
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kind: PersistentVolumeClaim
apiVersion: v1
metadata:
name: uploads-claim
spec:
dataSource:
name: uploads-snapshot
kind: VolumeSnapshot
apiGroup: snapshot.storage.k8s.io
accessModes:
- ReadWriteOnce
resources:
requests:
storage: {{ .Values.uploadsStorage }}

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deployment/helm/human-connection/values.yaml Normal file
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# domain is the user-facing domain.
domain: develop.human-connection.org
# commit is the latest github commit deployed.
commit: 889a7cdd24dda04a139b2b77d626e984d6db6781
# dbInitialization runs the database initializations in a post-install hook.
dbInitializion: "yarn prod:migrate init"
# dbMigrations runs the database migrations in a post-upgrade hook.
dbMigrations: "yarn prod:migrate up"
# bakendImage is the docker image for the backend deployment
backendImage: humanconnection/nitro-backend
# maintenanceImage is the docker image for the maintenance deployment
maintenanceImage: humanconnection/maintenance
# neo4jImage is the docker image for the neo4j deployment
neo4jImage: humanconnection/neo4j
# webappImage is the docker image for the webapp deployment
webappImage: humanconnection/nitro-web
# image configures pullPolicy related to the docker images
image:
# pullPolicy indicates when, if ever, pods pull a new image from docker hub.
pullPolicy: IfNotPresent
# letsencryptIssuer is used by cert-manager to set up certificates with the given provider.
letsencryptIssuer: "letsencrypt-prod"
# neo4jConfig changes any default neo4j config/adds it.
neo4jConfig:
# acceptLicenseAgreement is used to agree to the license agreement for neo4j's enterprise edition.
acceptLicenseAgreement: \"yes\"
# apocImportFileEnabled enables the import of files to neo4j using the plugin apoc
apocImportFileEnabled: \"true\"
# dbmsMemoryHeapInitialSize configures initial heap size. By default, it is calculated based on available system resources.(valid units are `k`, `K`, `m`, `M`, `g`, `G`)
dbmsMemoryHeapInitialSize: "500M"
# dbmsMemoryHeapMaxSize configures maximum heap size. By default it is calculated based on available system resources.(valid units are `k`, `K`, `m`, `M`, `g`, `G`)
dbmsMemoryHeapMaxSize: "500M"
# dbmsMemoryPagecacheSize configures the amount of memory to use for mapping the store files, in bytes (or 'k', 'm', and 'g')
dbmsMemoryPagecacheSize: "490M"
# neo4jResourceLimitsMemory configures the memory limits available.
neo4jResourceLimitsMemory: "2G"
# neo4jResourceLimitsMemory configures the memory available for requests.
neo4jResourceRequestsMemory: "1G"
# supportEmail is used for letsencrypt certs.
supportEmail: "devcom@human-connection.org"
# smtpHost is the host for the mailserver.
smtpHost: "mailserver.human-connection.org"
# smtpPort is the port to be used for the mailserver.
smtpPort: \"25\"
# jwtSecret is used to encode/decode a user's JWT for authentication
jwtSecret: "Yi8mJjdiNzhCRiZmdi9WZA=="
# privateKeyPassphrase is used for activity pub
privateKeyPassphrase: "YTdkc2Y3OHNhZGc4N2FkODdzZmFnc2FkZzc4"
# mapboxToken is used for the Mapbox API, geolocalization.
mapboxToken: "cGsuZXlKMUlqb2lhSFZ0WVc0dFkyOXVibVZqZEdsdmJpSXNJbUVpT2lKamFqbDBjbkJ1Ykdvd2VUVmxNM1Z3WjJsek5UTnVkM1p0SW4wLktaOEtLOWw3MG9talhiRWtrYkhHc1E="
uploadsStorage: "25Gi"
neo4jStorage: "5Gi"
developmentMailserverDomain: nitro-mailserver.human-connection.org

2
deployment/human-connection/deployment-backend.yaml
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@ -38,7 +38,7 @@ spec:
name: human-connection
image: humanconnection/nitro-backend:latest
imagePullPolicy: Always
name: nitro-backend
name: backend
ports:
- containerPort: 4000
protocol: TCP

2
deployment/volumes/neo4j-data.yaml
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@ -9,4 +9,4 @@
- ReadWriteOnce
resources:
requests:
storage: 5Gi
storage: {{ .Values.neo4jStorage }}

2
deployment/volumes/uploads.yaml
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@ -9,4 +9,4 @@
- ReadWriteOnce
resources:
requests:
storage: 25Gi
storage: {{ .Values.uploadsStorage }}

4
deployment/volumes/volume-snapshots/snapshot.yaml
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@ -2,9 +2,9 @@
apiVersion: snapshot.storage.k8s.io/v1alpha1
kind: VolumeSnapshot
metadata:
name: neo4j-data-snapshot
name: uploads-snapshot
namespace: human-connection
spec:
source:
name: neo4j-data-claim
name: uploads-claim
kind: PersistentVolumeClaim